In a Muslim Country such as Saudi Arabia,Lebanon or Kuwait are citizens allowed political protest?

First get some of your facts right. Lebanon is not a Muslim country. It is sectarian in that all religious denomination have specific representation in parliament according to the constitution, which also enforces the president as being a Maronite Christian - the Maronites are an Eastern Catholic sect and part of the Roman Catholic Church. Now as for the right of protest, Kuwait allows non violent protest just as the USA does, but also with the same requirement of permission by the local police authority. Saudi Arabia has begun to allow limited rights of protest.